drosoCAT The Drosophila melanogaster modENCODE ChIP Association Tester
drosoCAT allows you to easily compare your Drosophila melanogaster (dm3) ChIP peaks from your peak-called BED file with those from most all D. melanogaster modENCODE ChIP peaks from cell lines and embryos (other tissues will be added as pre-computed data becomes available).
Peaks that share significantly common genomic binding sites score highly, allowing easy identification of proteins that show similar or identical genomic distributions from those that are distinct.
More information on the ChIP Association Tester can be found here.
To use drosoCAT
- Select below the tissue(s) of interest.
- Datasets of ChIP'd proteins with pre-computed data available for these tissues can then be selected for analysis.
- Finally, you can simply obtain the association data selected, or upload your own dm3-mapped BED file(s).